cMap: the comparative genetic map viewer

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cMap: the comparative genetic map viewer

UNLABELLED cMap, a www comparative genetic map graphical utility, has a search capability and provides comparison of two genetic maps within or between species with dynamic links to data resources and text lists of the shared loci, running in a relational database environment. Currently, maps from three species (maize 'Zea mays L.', rice 'Oryza sativa L.', and sorghum 'Sorghum bicolor L.'), rep...

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MOTIVATION With the rapid accumulation of genetic data for a multitude of different species, the availability of intuitive comparative genomic tools becomes an important requirement for the research community. Here we describe a web-based comparative viewer for mapping data, including genetic, physical and cytological maps, that is part of the SGN website (http://sgn.cornell.edu/) but that can ...

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CMap 1.01: a comparative mapping application for the Internet

UNLABELLED CMap is a web-based tool for displaying and comparing maps of any type and from any species. A user can compare an unlimited number of maps, view pair-wise comparisons of known correspondences, and search for maps or for features by name, species, type and accession. CMap is freely available, can run on a variety of database engines and uses only free and open software components. ...

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Chapter 24: Exercises: Using Map Viewer

This chapter contains tutorials for using Map Viewer. Step-by-step instructions are provided for several common biological research problems that can be addressed by exploiting the whole-genome and positional perspectives of Map Viewer. Please be aware that the examples in these tutorials may return different results when you execute them, because the underlying data may have been updated, but ...

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ژورنال

عنوان ژورنال: Bioinformatics

سال: 2003

ISSN: 1367-4803,1460-2059

DOI: 10.1093/bioinformatics/btg012